Laboratory of Molecular Genetics of Microorganisms

All bacteriophages

Thermus phage phiLo

Host
Thermus thermophilus HB8
Morphotype
myovirus
Lifecycle
lytic
Genome type
dsDNA
Genome length, bp
178 531
GC content, %
50.7
Accession
MH673673

Genome map

phiLo178 531 bp · 166 coding sequences · 4 tRNAs

hypothetical protein — 118..381 (+) · 264 bphypothetical protein — 412..2 289 (+) · 1 878 bphypothetical protein — 2 320..2 574 (+) · 255 bphypothetical protein — 2 619..3 086 (+) · 468 bphypothetical protein — 3 270..4 319 (+) · 1 050 bpendonuclease subunit — 4 412..7 012 (+) · 2 601 bphypothetical protein — 7 340..7 765 (+) · 426 bphypothetical protein — 7 769..8 854 (+) · 1 086 bpputative DNA-directed DNA polymerase I — 8 915..12 442 (+) · 3 528 bphypothetical protein — 12 432..13 145 (+) · 714 bphypothetical protein — 12 997..14 292 (+) · 1 296 bptail sheath protein FI — 14 624..16 240 (+) · 1 617 bphypothetical protein — 16 273..16 803 (+) · 531 bpputative transposase — 17 162..18 457 (+) · 1 296 bphypothetical protein — 18 530..18 826 (+) · 297 bphypothetical protein — 19 172..19 912 (+) · 741 bphypothetical protein — 19 956..20 555 (+) · 600 bphypothetical protein — 20 558..21 307 (+) · 750 bpputative Cro/Cl family transcriptional regulator — 21 352..21 699 (+) · 348 bphypothetical protein — 21 813..22 547 (+) · 735 bphypothetical protein — 22 561..23 091 (+) · 531 bphypothetical protein — 23 809..24 144 (+) · 336 bpputative transposase — 24 173..24 730 (+) · 558 bpputative transposase — 24 700..25 302 (+) · 603 bpputative arylsulfatase regulator/Fe-S oxidoreductase — 25 359..26 807 (+) · 1 449 bpputative methyltransferase — 26 837..27 871 (+) · 1 035 bphypothetical protein — 27 941..28 117 (+) · 177 bphypothetical protein — 28 164..29 693 (+) · 1 530 bphypothetical protein — 29 739..31 088 (+) · 1 350 bphypothetical protein — 31 165..32 589 (−) · 1 425 bphypothetical protein — 32 611..34 959 (−) · 2 349 bphypothetical protein — 34 994..37 021 (−) · 2 028 bphypothetical protein — 37 040..37 486 (−) · 447 bphypothetical protein — 37 483..38 601 (−) · 1 119 bpbase plate wedge component — 38 613..40 265 (−) · 1 653 bphypothetical protein — 40 513..42 057 (−) · 1 545 bpbase plate wedge subunit — 42 068..42 448 (−) · 381 bphypothetical protein — 42 477..42 869 (−) · 393 bphypothetical protein — 43 012..43 224 (−) · 213 bphypothetical protein — 43 237..43 902 (−) · 666 bpDNA methylase — 44 202..44 948 (−) · 747 bphypothetical protein — 45 009..45 395 (+) · 387 bphypothetical protein — 45 646..45 846 (+) · 201 bpDNA helicase-like protein — 45 892..47 880 (+) · 1 989 bphypothetical protein — 48 284..51 115 (+) · 2 832 bphypothetical protein — 51 133..51 609 (+) · 477 bphypothetical protein — 51 959..52 276 (+) · 318 bpSNF2-related protein — 52 360..54 360 (+) · 2 001 bpNA ligase 1 and tail fiber attachment catalyst — 54 394..55 533 (+) · 1 140 bphypothetical protein — 55 693..56 589 (−) · 897 bphypothetical protein — 56 603..59 266 (−) · 2 664 bphypothetical protein — 59 402..60 001 (+) · 600 bphypothetical protein — 60 315..62 201 (−) · 1 887 bphypothetical protein — 62 267..64 066 (−) · 1 800 bphypothetical protein — 64 071..65 843 (−) · 1 773 bpputative major surface glycoprotein — 65 889..67 001 (−) · 1 113 bphypothetical protein — 66 943..67 707 (−) · 765 bphypothetical protein — 67 725..67 985 (−) · 261 bphypothetical protein — 68 004..68 963 (−) · 960 bphypothetical protein — 69 068..69 673 (−) · 606 bphypothetical protein — 69 873..71 522 (−) · 1 650 bphypothetical protein — 71 513..71 839 (−) · 327 bphypothetical protein — 71 932..74 211 (−) · 2 280 bphypothetical protein — 74 318..76 135 (−) · 1 818 bphypothetical protein — 76 153..76 419 (−) · 267 bphypothetical protein — 76 530..78 410 (−) · 1 881 bphypothetical protein — 78 426..78 854 (−) · 429 bphypothetical protein — 78 924..79 091 (−) · 168 bphypothetical protein — 79 208..79 651 (+) · 444 bphypothetical protein — 80 127..80 786 (−) · 660 bpputative transposase — 80 785..81 927 (+) · 1 143 bphypothetical protein — 82 225..82 872 (−) · 648 bpputative peptidase M66 — 83 061..83 864 (−) · 804 bpputative base plate wedge protein — 83 881..84 312 (−) · 432 bphypothetical protein — 84 122..84 463 (+) · 342 bphypothetical protein — 84 565..85 035 (+) · 471 bphypothetical protein — 85 078..85 509 (+) · 432 bphypothetical protein — 85 562..87 364 (+) · 1 803 bpputative ferritin — 87 443..87 895 (+) · 453 bphypothetical protein — 87 913..88 383 (+) · 471 bphypothetical protein — 88 407..88 697 (+) · 291 bpputative tail protein — 88 747..89 571 (+) · 825 bphypothetical protein — 89 504..89 635 (+) · 132 bphypothetical protein — 89 568..89 978 (−) · 411 bphypothetical protein — 89 988..93 284 (−) · 3 297 bpputative Cro/Cl family transcriptional regulator — 93 375..94 031 (−) · 657 bphypothetical protein — 94 479..95 990 (−) · 1 512 bphypothetical protein — 96 003..96 359 (−) · 357 bphypothetical protein — 96 250..96 879 (+) · 630 bphypothetical protein — 96 883..97 980 (+) · 1 098 bpdNMP kinase — 98 020..98 589 (−) · 570 bpribonucleoside-triphosphate reductase — 98 698..101 547 (−) · 2 850 bphypothetical protein — 102 268..103 062 (−) · 795 bpputative chromosome segregation protein — 103 080..103 436 (−) · 357 bphypothetical protein — 103 523..104 173 (−) · 651 bphypothetical protein — 104 195..104 557 (−) · 363 bphypothetical protein — 104 627..104 965 (−) · 339 bphypothetical protein — 104 987..105 421 (−) · 435 bphypothetical protein — 105 483..106 364 (−) · 882 bphypothetical protein — 106 345..106 590 (−) · 246 bphypothetical protein — 106 751..108 010 (−) · 1 260 bphypothetical protein — 107 956..108 585 (−) · 630 bpthymidylate synthase — 108 534..109 304 (−) · 771 bpputative replicative DNA helicase — 109 406..111 295 (−) · 1 890 bphypothetical protein — 111 302..112 288 (−) · 987 bphypothetical protein — 112 315..112 725 (−) · 411 bphypothetical protein — 112 802..113 245 (−) · 444 bphypothetical protein — 113 300..114 022 (−) · 723 bphypothetical protein — 114 299..115 702 (−) · 1 404 bphypothetical protein — 115 773..116 621 (−) · 849 bphypothetical protein — 116 720..118 444 (−) · 1 725 bpprohead core and protease — 118 456..119 883 (−) · 1 428 bphypothetical protein — 119 959..121 809 (−) · 1 851 bphypothetical protein — 121 818..122 327 (−) · 510 bphypothetical protein — 122 409..123 143 (−) · 735 bphypothetical protein — 123 197..124 627 (−) · 1 431 bphypothetical protein — 124 689..125 516 (−) · 828 bphypothetical protein — 125 697..125 900 (−) · 204 bphypothetical protein — 126 014..126 328 (+) · 315 bphypothetical protein — 126 330..126 659 (−) · 330 bpputative transposase — 127 139..128 284 (−) · 1 146 bphypothetical protein — 128 385..129 329 (−) · 945 bphypothetical protein — 129 440..129 724 (−) · 285 bphypothetical protein — 129 793..130 377 (−) · 585 bpputative molecular chaperone — 130 750..131 196 (+) · 447 bphypothetical protein — 131 296..131 799 (+) · 504 bphypothetical protein — 131 989..132 681 (+) · 693 bphypothetical protein — 132 952..133 401 (−) · 450 bphypothetical protein — 133 450..133 851 (−) · 402 bpATPase — 134 059..134 718 (−) · 660 bpputative SAM-dependent methlyltransferase — 135 079..136 221 (−) · 1 143 bphypothetical protein — 136 330..136 686 (−) · 357 bphypothetical protein — 136 801..137 391 (−) · 591 bphypothetical protein — 137 455..137 826 (−) · 372 bphypothetical protein — 137 959..139 083 (+) · 1 125 bpputative stage V sporulation protein R — 139 144..140 997 (+) · 1 854 bpserine kinase — 141 099..142 907 (+) · 1 809 bphypothetical protein — 143 062..143 691 (+) · 630 bphypothetical protein — 143 704..144 141 (+) · 438 bphypothetical protein — 144 261..147 134 (+) · 2 874 bphypothetical protein — 147 596..149 104 (+) · 1 509 bphypothetical protein — 149 151..149 387 (+) · 237 bpTnpB — 149 421..150 956 (+) · 1 536 bphypothetical protein — 151 521..152 246 (+) · 726 bphypothetical protein — 152 699..153 331 (+) · 633 bphypothetical protein — 153 671..154 282 (+) · 612 bpputative recombinase — 154 297..155 439 (+) · 1 143 bpputative cytosine-specific methyltransferase — 155 473..156 672 (+) · 1 200 bpputative transcriptional regulator — 157 555..157 833 (−) · 279 bpputative type III restriction endonuclease subunit R — 157 950..160 526 (−) · 2 577 bpputative restriction endonuclease — 160 529..160 876 (−) · 348 bpputative DNA methylase — 160 926..161 681 (−) · 756 bphypothetical protein — 161 729..162 547 (−) · 819 bpputative restriction endonuclease — 162 590..163 156 (−) · 567 bpputative transposase — 163 207..163 461 (−) · 255 bphypothetical protein — 163 498..164 766 (−) · 1 269 bphypothetical protein — 165 074..165 589 (+) · 516 bphypothetical protein — 166 101..166 337 (+) · 237 bphypothetical protein — 167 039..167 389 (+) · 351 bphypothetical protein — 167 425..168 102 (+) · 678 bphypothetical protein — 168 099..168 413 (+) · 315 bphypothetical protein — 168 435..168 977 (+) · 543 bphypothetical protein — 168 937..169 611 (+) · 675 bphypothetical protein — 169 644..171 860 (+) · 2 217 bphypothetical protein — 171 917..173 350 (+) · 1 434 bphypothetical protein — 173 360..178 531 (+) · 5 172 bp · partial frametRNA-Ser — 130 586..130 673 (+) · 88 bptRNA-Ser — 152 299..152 391 (+) · 93 bptRNA-Arg — 157 257..157 330 (−) · 74 bptRNA-Met — 164 910..164 983 (+) · 74 bp

Sequences

FileKindVersionSize
phiLo_genome.gb.gzannotation114 KB

Related publications

  1. Natural diversity of CRISPR spacers of Thermus : evidence of local spacer acquisition and global spacer exchange

    Anna Lopatina et al.

    Philosophical Transactions of the Royal Society B: Biological Sciences2019