LOCUS phiKo 11129 bp DNA linear UNA 28-SEP-2026 DEFINITION Thermus phage phiKo, complete genome. ACCESSION MH673671 KEYWORDS . SOURCE Thermus phage phiKo ORGANISM Thermus phage phiKo. FEATURES Location/Qualifiers source 1..11129 /country="Italy" /db_xref=2301535 /host="Thermus thermophilus HB27" /isolation_source="hot spring water" /mol_type="genomic DNA" /organism="Thermus phage phiKo" /label="source" ITR 1..16 /note="
inverted terminal repeat" /label="ITR" CDS 85..618 /codon_start=1 /locus_tag="phiKo_26" /product="hypothetical protein" /protein_id="AYJ74701.1" /transl_table=11 /translation="MTALMGTRRHAYEVLRKWATDEAGDSLAEAVAAVLPWWYLDRYL DRLATDDGFREALGLAALELPGLGEVGRTEAYAAAKAILRALKDCPEDVLAWILLFGG KYLSARGDRVEVGSKIHPGFEVSLSLVGGEIATVYVVVGGALGLESGEVGGKVAHLIG AAARTVLAIALEGGREE*" /label="phiKo_26" gene 85..618 /locus_tag="phiKo_26" /label="phiKo_26" misc_feature 116..121 /Recognition_pattern="C^GTACG" /label="BsiWI, Pfl23II, PspLI" /note="Geneious type: restriction site" misc_feature 271..276 /Recognition_pattern="GAG^CTC" /label="Ecl136II, Eco53kI, EcoICRI" /note="Geneious type: restriction site" misc_feature 271..276 /Recognition_pattern="GAGCT^C" /label="SacI, Psp124BI, SstI" /note="Geneious type: restriction site" primer_bind 451..471 /Tm=59 /Description="" /label="phiKo_ORF26_qPCR_fwd" misc_feature 480..483 /Recognition_pattern="^AATT" /label="MluCI, Sse9I, TasI" /note="Geneious type: restriction site" misc_feature complement(553..570) /Tm=59 /Description="" /label="phiKo_ORF26_qPCR_rev" /note="Geneious type: primer_bind_reverse" CDS 615..902 /codon_start=1 /locus_tag="phiKo_25" /product="hypothetical protein" /protein_id="AYJ74700.1" /transl_table=11 /translation="MTYPTIYHAMRHYYLPHEVAALLRGKAEVREEEGRPVVVDSEGR VRLKAVSVLVEIQSRWGGATGLATPHWAFPMEDVEALLRALRRPAKGRKRG*" /label="phiKo_25" gene 615..902 /locus_tag="phiKo_25" /label="phiKo_25" misc_feature 663..671 /Recognition_pattern="CACNNN^GTG" /label="DraIII, AdeI" /note="Geneious type: restriction site" misc_feature 663..668 /Recognition_pattern="CACGAG(-5/-1)" /label="BauI, BssSI, Bst2BI" /note="Geneious type: restriction site" misc_feature 778..783 /Recognition_pattern="R^GATCY" /label="BstX2I, BstYI, MflI, PsuI" /note="Geneious type: restriction site" CDS 908..1102 /codon_start=1 /locus_tag="phiKo_24" /product="hypothetical protein" /protein_id="AYJ74699.1" /transl_table=11 /translation="MILEVRRIGNGRWEVAVIRPGANPTYLVVYSYQDARELAALLGE LIGEPVSVRQVREEVVGEDE*" /label="phiKo_24" gene 908..1102 /locus_tag="phiKo_24" /label="phiKo_24" CDS 1113..1496 /codon_start=1 /locus_tag="phiKo_23" /product="hypothetical protein" /protein_id="AYJ74698.1" /transl_table=11 /translation="MGQELGAVELGSGKRYLTWKEYLEKVGDPKGYTGTHAVIRIWPP AKYPSATLVFWVDDPNHPEGGYGVRKSIPPLLWSTLERAGFVPGKARKGGTLYLDFQG GTMKLILEEDSGVYAPDKSGGWELV*" /label="phiKo_23" gene 1113..1496 /locus_tag="phiKo_23" /label="phiKo_23" misc_feature 1192..1198 /Recognition_pattern="GG^GWCCC" /label="KflI" /note="Geneious type: restriction site" misc_feature 1520..1525 /Recognition_pattern="GTT^AAC" /label="HpaI, KspAI" /note="Geneious type: restriction site" CDS 1557..1775 /codon_start=1 /locus_tag="phiKo_22" /product="hypothetical protein" /protein_id="AYJ74697.1" /transl_table=11 /translation="MPEEMGDGFILVYGRGETEEARENGYLPDVDEYRATFATFHEAY MYAETIPVPTTIVYDEETDTWEVYVDYE*" /label="phiKo_22" gene 1557..1775 /locus_tag="phiKo_22" /label="phiKo_22" misc_feature 1666..1671 /Recognition_pattern="TCG^CGA" /label="NruI, Bsp68I, BtuMI, RruI" /note="Geneious type: restriction site" misc_feature 1758..1763 /Recognition_pattern="TAC^GTA" /label="SnaBI, BstSNI, Eco105I" /note="Geneious type: restriction site" CDS 1784..2731 /codon_start=1 /locus_tag="phiKo_21" /product="DNA polymerase B" /protein_id="AYJ74696.1" /transl_table=11 /translation="MSALVVEPVWDWWEKAHHYPVEDDMHRQMAEDIFLNGAPEGAQM AHVSPNLITIHYGGDRVRWERWRRLDAAGKLPSDYARAALKGAYRVWRPKWGRPEMEA MRRWGYPPIHAQPGMYEDMAYVDVRSAYGTLYTLYWGVEYWPMRWLSLPRRAIVWPEE LRANKLARNALYGLIRSEGLWAYRPGRKRLWLPNRMAYPQVALAVVDVLHTVAWRAVR DMGAVYVMIDGIILPERNVPLLMDYVASMGLEGRVDAVGPANVEGVGAYAMPGKSTRR RGNGRPFSNLKGEALGEWLEAATRRFLACRRYILGGEAL*" /label="DNAP" gene 1784..2731 /locus_tag="phiKo_21" /label="phiKo_21" misc_feature 1919..1924 /Recognition_pattern="CAC^GTG" /label="PmaCI, AcvI, BbrPI, Eco72I, PmlI, PspCI" /note="Geneious type: restriction site" misc_feature 2158..2163 /Recognition_pattern="C^GTACG" /label="BsiWI, Pfl23II, PspLI" /note="Geneious type: restriction site" misc_feature 2286..2291 /Recognition_pattern="GCAATG(2/0)" /label="BsrDI, Bse3DI, BseMI" /note="Geneious type: restriction site" primer_bind 2489..2508 /Tm=57 /Description="" /label="phiKo_ps_F" CDS 2728..3243 /codon_start=1 /locus_tag="phiKo_20" /product="lysozyme" /protein_id="AYJ74695.1" /transl_table=11 /translation="MNWIEFWRSKKPTWRHRPVDPAYIVLHHTAGPVDQAPQAIWDYH VKVRGWPHGGYHFLVYHDGTVVKMLPLSAQPICVGEYNHLAICIALVGNFVGGYPPEW NERAPGWKSLAWLVRELRKHDSGLRLRLVRHKDLRPTKCPGTVTWEEALVRGGVPQEQ VETLKVAGVIA*" /modified_by="matve" /label="endolysin" gene 2728..3243 /locus_tag="phiKo_20" /label="phiKo_20" misc_feature complement(2796..2815) /Tm=59 /Description="" /label="phiKo_ps_R" /note="Geneious type: primer_bind_reverse" misc_feature 2857..2862 /Recognition_pattern="CAC^GTG" /label="PmaCI, AcvI, BbrPI, Eco72I, PmlI, PspCI" /note="Geneious type: restriction site" primer_bind 2935..2944 /Tm=39 /Description="" /label="phiKo_M2.4_qPCR_fwd" misc_feature 2952..2957 /Recognition_pattern="CA^TATG" /label="NdeI, FauNDI" /note="Geneious type: restriction site" primer_bind 2999..3008 /Tm=36 /Description="" /label="phiKo_ORF03_qPCR_rev" misc_feature 3079..3084 /Recognition_pattern="GAG^CTC" /label="Ecl136II, Eco53kI, EcoICRI" /note="Geneious type: restriction site" misc_feature 3079..3084 /Recognition_pattern="GAGCT^C" /label="SacI, Psp124BI, SstI" /note="Geneious type: restriction site" misc_feature 3172..3184 /Recognition_pattern="(7/12)GAAGNNNNNNTAC(12/7)" /label="BarI" /note="Geneious type: restriction site" misc_feature 3191..3197 /Recognition_pattern="GG^GWCCC" /label="KflI" /note="Geneious type: restriction site" CDS 3259..3507 /codon_start=1 /locus_tag="phiKo_19" /product="head morphogenesis protein" /protein_id="AYJ74694.1" /transl_table=11 /translation="MPRELEEKAAKLREQLNRLYERSDALMAEIKRLQDEAAGKQGME RWTILRRAYKLKDEWNSVAKQIMNMGVRLARIEEALGR*" /modified_by="matve" /label="HMP" gene 3259..3507 /locus_tag="phiKo_19" /label="phiKo_19" misc_feature 3306..3318 /Recognition_pattern="(7/12)GAACNNNNNNTAC(12/7)" /label="PsrI" /note="Geneious type: restriction site" primer_bind 3333..3342 /Tm=20 /Description="" /label="IC_spacer_2.4" CDS 3510..3731 /codon_start=1 /locus_tag="phiKo_18" /product="hypothetical protein" /protein_id="AYJ74693.1" /transl_table=11 /translation="MEELCLIAGPVASLVVQALKRFPVVQRYPKVVLAALTGAYVLVQ GTGWECWVAAFASGIAGYEVVIKPVAKKE*" /label="phiKo_18" gene 3510..3731 /locus_tag="phiKo_18" /label="phiKo_18" misc_feature 3533..3539 /Recognition_pattern="CG^GWCCG" /label="RsrII, CpoI, CspI, Rsr2I" /note="Geneious type: restriction site" misc_feature 3669..3674 /Recognition_pattern="GAATGC(1/-1)" /label="BsmI, Mva1269I, PctI" /note="Geneious type: restriction site" misc_feature 3733..3738 /Recognition_pattern="GCAATG(2/0)" /label="BsrDI, Bse3DI, BseMI" /note="Geneious type: restriction site" CDS 3736..3921 /codon_start=1 /locus_tag="phiKo_17" /product="ribonuclease Z" /protein_id="AYJ74692.1" /transl_table=11 /translation="MDWVQAIRDIGFPIVVSLLLLLKLDASLNRLREAVEENTRILRV GFRVMNGHKEEDVHGKR*" /modified_by="matve" /label="RNase Z" gene 3736..3921 /locus_tag="phiKo_17" /label="phiKo_17" misc_feature 3799..3804 /Recognition_pattern="C^TTAAG" /label="AflII, BfrI, BspTI, BstAFI, MspCI, Vha464I" /note="Geneious type: restriction site" misc_feature 3802..3807 /Recognition_pattern="A^AGCTT" /label="HindIII" /note="Geneious type: restriction site" CDS 3925..4770 /codon_start=1 /locus_tag="phiKo_14_17" /product="hypothetical protein" /transl_table=11 /translation="MGSPEADKERLGSLTAEPGGEGGGGPRGGAGSGGGGGGSRGGGG GSRGGSGGGGRSARRGRGGSGSGSGGRSGGGGEGGLGPAVPDSGGSASAGARELGEDA AAEALPSPTPRPVAPPRASDAAALGALGEMLLKAIMGGLSLVLGPHWAVSDEEAKAWG KALEDWAKAQPPKRRKALSKALGAVPTVNLIGTTALIVAPRVQATLQMRAAKKEAEDG RKGRAGSGVPGTLGADSPGSPEKPYGYDFAGAVKRLSEQDAGGAGSGDSGGNGGVRGA PKARA*" /label="phiKo_14_17" gene 3925..4770 /locus_tag="phiko_14_17" /label="phiko_14_17" misc_feature 3971..3979 /Recognition_pattern="CAGNNN^CTG" /label="AlwNI, CaiI, PstNI" /note="Geneious type: restriction site" misc_feature 4166..4176 /Recognition_pattern="GACNNN^NNGTC" /label="Eam1105I, AhdI, BmeRI, DriI" /note="Geneious type: restriction site" misc_feature 4183..4188 /Recognition_pattern="T^CCGGA" /label="AccIII, Aor13HI, BseAI, Bsp13I, BspEI, Kpn2I, MroI" /note="Geneious type: restriction site" misc_feature complement(4397..4434) /Tm=74 /Description="" /label="Ko_M16.2" /note="Geneious type: primer_bind_reverse" misc_feature complement(4530..4547) /Tm=60 /Description="" /label="phiKo_M2.4_qPCR_rev" /note="Geneious type: primer_bind_reverse" CDS 4776..5387 /codon_start=1 /locus_tag="phiKo_14" /product="DNA packaging ATPase" /protein_id="AYJ74689.1" /transl_table=11 /translation="MDWRRIGHSDRVAVVGTTGAGKSTLLRAMMASRPWVLLYDPKGE WEGEEWLTVREAAKLPRKPHPRVRYFPLPDELRDKEALDDFFWWAYYAKNLTVVVDEA YLATLAGAWLPPGYQACLAQGRSRGVAVWTATQRPYKIPQTILSEAEHWFVFRLNAPQ DRWAVHQWTGLDSRLISPENLPKRVWYYVSEGQVYGPYMLRLE*" /modified_by="matve" /label="DNA packaging ATPase" gene 4776..5387 /locus_tag="phiKo_14" /label="phiKo_14" misc_feature 5268..5273 /Recognition_pattern="G^TGCAC" /label="ApaLI, Alw44I, VneI" /note="Geneious type: restriction site" CDS 5401..6426 /codon_start=1 /locus_tag="phiKo_13" /product="putative major capsid protein" /protein_id="AYJ74688.1" /transl_table=11 /translation="MAGNAQQASGGGTIPFRYGSRMRIQRVGFIPFQENTQAPPLELP RVGFLAAVVLEWRGAISGTGVSVGPRGPWALVRRLRLGLNLGAVNIYDTSGYGNYLIN LLNGRDFTKHPLYDSTSRWHYHIPVAVNLGENATTGLVLLQDPEVRATVEVTWGALAD AFNGTGLSVDSGAGLDVYYVYFEVPDLRKVSAPPLVLHRVLEDTQPITQTGDNAYLVP RQGILLQLAHTLTLNGAFSNAWDRAFVRLNRTDTIMEVIPGVHYALDLQGRNAQTSPI TPTHVIFHDLFRAMGALDRGDLRDALDTEAVTTTESVVTVSQSATLGANNNFLGAIRR IIQPIRV*" /modified_by="matve" /label="MCP" gene 5401..6426 /locus_tag="phiKo_13" /label="phiKo_13" misc_feature 5463..5472 /Recognition_pattern="GATNN^NNATC" /label="BsaBI, Bse8I, BseJI" /note="Geneious type: restriction site" misc_feature 5605..5612 /Recognition_pattern="CC^TCGAGG" /label="AbsI" /note="Geneious type: restriction site" misc_feature 5605..5612 /Recognition_pattern="VC^TCGAGB" /label="PspXI" /note="Geneious type: restriction site" misc_feature 5606..5611 /Recognition_pattern="C^TCGAG" /label="XhoI, PaeR7I, Sfr274I, SlaI" /note="Geneious type: restriction site" misc_feature 5607..5610 /Recognition_pattern="T^CGA" /label="TaqI" /note="Geneious type: restriction site" misc_feature 5627..5632 /Recognition_pattern="TGC^GCA" /label="Acc16I, FspI, NsbI" /note="Geneious type: restriction site" misc_feature 5746..5756 /Recognition_pattern="GACNNN^NNGTC" /label="Eam1105I, AhdI, BmeRI, DriI" /note="Geneious type: restriction site" misc_feature 6371..6384 /Recognition_pattern="(7/12)GAANNNNNNNTTGG(11/6)" /label="AjuI" /note="Geneious type: restriction site" CDS 6440..6814 /codon_start=1 /locus_tag="phiKo_12" /product="hypothetical protein" /protein_id="AYJ74687.1" /transl_table=11 /translation="MLSDYVALNNVLPSVGGWSLGEQATAGLQDATQPATTASGKTPT GQGALLEGQSPLVTFLVVLGFLLLLMWLAHTYGEPGEYSNLKASAYNVLFIGLTAALF IPLLKVAAVKIPGPWTSYFLSI*" /label="phiKo_12" gene 6440..6814 /locus_tag="phiKo_12" /label="phiKo_12" misc_feature 6467..6472 /Recognition_pattern="AA^CGTT" /label="AclI, Psp1406I" /note="Geneious type: restriction site" CDS 6823..6996 /codon_start=1 /locus_tag="phiKo_11" /product="hypothetical protein" /protein_id="AYJ74686.1" /transl_table=11 /translation="MWEYLQAKAQEWLGRTGLTFQVVLVLVLLYLGYRAGTPWLIAAI LVSMVVLAGGGGE*" /label="phiKo_11" gene 6823..6996 /locus_tag="phiKo_11" /label="phiKo_11" misc_feature 6834..6841 /Recognition_pattern="CCTGCA^GG" /label="Sse8387I, SbfI, SdaI" /note="Geneious type: restriction site" CDS 6983..7123 /codon_start=1 /locus_tag="phiKo_10" /product="hypothetical protein" /protein_id="AYJ74685.1" /transl_table=11 /translation="VAVSRLGWAIIAAVVLALTATYFRPLWIVVGLVILIFLLNAVGG GR*" /label="phiKo_10" gene 6983..7123 /locus_tag="phiKo_10" /label="phiKo_10" CDS 7125..7277 /codon_start=1 /locus_tag="phiKo_09" /product="hypothetical protein" /protein_id="AYJ74684.1" /transl_table=11 /translation="MDTVEKIALTALAIVAVIVVLQRGTAAAQVVNAIGSTYTNLVKT LVSAPK*" /label="phiKo_09" gene 7125..7277 /locus_tag="phiKo_09" /label="phiKo_09" CDS 7288..7602 /codon_start=1 /locus_tag="phiKo_08" /product="hypothetical protein" /protein_id="AYJ74683.1" /transl_table=11 /translation="MCNREVALPRSRYAQALRDEAGLPTRPYDYYSRPSMYPGPVGPV PAPPTIPVPTPIGILPGYRGELSALKYQGVVPREHPAGPYAPEGGYITWADVVKRRGD GG*" /label="phiKo_08" gene 7288..7602 /locus_tag="phiKo_08" /label="phiKo_08" misc_feature 7359..7364 /Recognition_pattern="CACGAG(-5/-1)" /label="BauI, BssSI, Bst2BI" /note="Geneious type: restriction site" CDS 7592..8071 /codon_start=1 /locus_tag="phiKo_07" /product="peptidase" /protein_id="AYJ74682.1" /transl_table=11 /translation="MEVKDYLPFAVVGGGALLAYLLLKPQPYTVVNPPTPQGPSEDAR LNAVVALTQLAVERERARWEYAATVEAAKAQAEYELRARQIEAEQEARRIQAEKEVQQ KAADAQFWGTFWSGLFGIIGSGLALFAGLSDEALYNRLPYPPYIGHGGQLAALSRRR* " /modified_by="matve" /label="peptidase" gene 7592..8071 /locus_tag="phiKo_07" /label="phiKo_07" misc_feature 7754..7759 /Recognition_pattern="GCAGTG(2/0)" /label="BtsI" /note="Geneious type: restriction site" misc_feature 7924..7929 /Recognition_pattern="AA^CGTT" /label="AclI, Psp1406I" /note="Geneious type: restriction site" CDS 8074..8547 /codon_start=1 /locus_tag="phiKo_06_7" /product="hypothetical protein" /transl_table=11 /translation="MGIAIEPIDSGPCVDSDCYYARGERLTWWEAPPPPPPSNPALDP PPPPPPQREERPRIDPPPTLFDQPSYSAEPPPSPPPSTPSPPVDPEPPPDPLPPVTSD DPLYSVIGELLGGREPTAQPEPIVLAPPPSNPSLALWIMALAVVGVLGYAWLQRR*" /label="phiKo_06_7" gene 8074..8547 /locus_tag="phiKo_06_7" /label="phiKo_06_7" misc_feature 8098..8107 /Recognition_pattern="GACNN^NNGTC" /label="PshAI, BoxI, BstPAI" /note="Geneious type: restriction site" misc_feature 8152..8158 /Recognition_pattern="A^CCWGGT" /label="SexAI, CsiI, MabI" /note="Geneious type: restriction site" misc_feature 8258..8269 /Recognition_pattern="(11/13)CAANNNNNGTGG(12/10)" /label="CspCI" /note="Geneious type: restriction site" CDS 8550..8801 /codon_start=1 /locus_tag="phiKo_06" /product="hypothetical protein" /protein_id="AYJ74681.1" /transl_table=11 /translation="MDWGKLIGFRRYQRQNPDAYVAPTSPLPEWPPLPQTGTFAHWGD DVLANLSGGAARAMWDWPARYATVEAFTPPEVVLRWPTP*" /label="phiKo_06" gene 8550..8801 /locus_tag="phiKo_06" /label="phiKo_06" misc_feature 8689..8694 /Recognition_pattern="TGG^CCA" /label="BalI, MlsI, MluNI, Mox20I, MscI, Msp20I" /note="Geneious type: restriction site" CDS 8786..9343 /codon_start=1 /locus_tag="phiKo_05" /product="hypothetical protein" /protein_id="AYJ74680.1" /transl_table=11 /translation="VAYALDVYQLLRDCTGRDDLARLGTAIFLHEKGPQGYEAGYGYT DSGPLPEWRGFQKQIQGVCSELTRFFQGRPVNAYTVREFWREEWRASDIGWPQKVWAW YLRLAGAPTDKLAQMPIGRGEASRPSPLLPRIPTVEDKLQGSLSPRVQEVLEQRTPEA VRKALLIGLGAIGLAVVWYEVGRRV*" /label="phiKo_05" gene 8786..9343 /locus_tag="phiKo_05" /label="phiKo_05" misc_feature 9059..9064 /Recognition_pattern="GAT^ATC" /label="EcoRV, Eco32I" /note="Geneious type: restriction site" CDS 9340..9771 /codon_start=1 /locus_tag="phiKo_04" /product="hypothetical protein" /protein_id="AYJ74679.1" /transl_table=11 /translation="MSLTPQGVSGNSVGGDSSSSAWPSTLVAPGTIYHLGRWTGQTLR KLILSTATDSIVYGRVQIALDYPRGGLHPGNNALPNALVDLPLNFSPQHPIISLDFTP GLVTVLPGESIYLIVYDFMSTTSAAITWGLNMFWEPLGGER*" /label="phiKo_04" gene 9340..9771 /locus_tag="phiKo_04" /label="phiKo_04" misc_feature 9389..9395 /Recognition_pattern="GCTCTTC(1/4)" /label="SapI, BspQI, LguI, PciSI" /note="Geneious type: restriction site" misc_feature 9627..9632 /Recognition_pattern="A^AGCTT" /label="HindIII" /note="Geneious type: restriction site" misc_feature 9648..9653 /Recognition_pattern="A^CTAGT" /label="SpeI, AhlI, BcuI" /note="Geneious type: restriction site" misc_feature 9698..9703 /Recognition_pattern="T^CATGA" /label="BspHI, CciI, PagI" /note="Geneious type: restriction site" misc_feature 9713..9718 /Recognition_pattern="CCGC^GG" /label="SacII, Cfr42I, KspI, Sfr303I, SgrBI" /note="Geneious type: restriction site" CDS 9768..10577 /codon_start=1 /locus_tag="phiKo_03" /product="tail protein" /protein_id="AYJ74678.1" /transl_table=11 /translation="MSLEIFPTYPEIRTEQLSAVEWDKLPNLSTLVISVIRNAPTITP SPGDWLLGVLAGGTEVGKLPIGQADGVPLLNASGALASADAYLSRGSVTSAVDWNTLT NAGTYEIASGAFGTGSANTPPAVTQQGHLLVLKTSGATTQVYVPKSADPGIYWRQYAG GTWSSWATAGVMYGSNSNGSYIRFADGTQICWREATWEMPTGWSTGPSVPWPAAFVAT PRVWLNYTRSGWRIILSDITNNSTTIQLSAYNFDTTVTPYRVDILAIGRWK*" /label="phiKo_03" gene 9768..10577 /locus_tag="phiKo_03" /label="phiKo_03" primer_bind 9847..9866 /Tm=59 /Description="" /label="phiKo_ORF03_qPCR_fwd" misc_feature 9907..9917 /Recognition_pattern="(8/13)GAGNNNNNCTC(13/8)" /label="BplI" /note="Geneious type: restriction site" misc_feature 9936..9946 /Recognition_pattern="(10/15)ACNNNNGTAYC(12/7)" /label="BaeI" /note="Geneious type: restriction site" misc_feature 9971..9975 /Recognition_pattern="CGWCG^" /label="Hpy99I" /note="Geneious type: restriction site" misc_feature 10006..10011 /Recognition_pattern="TCG^CGA" /label="NruI, Bsp68I, BtuMI, RruI" /note="Geneious type: restriction site" misc_feature 10016..10020 /Recognition_pattern="CGWCG^" /label="Hpy99I" /note="Geneious type: restriction site" misc_feature 10084..10089 /Recognition_pattern="CA^TATG" /label="NdeI, FauNDI" /note="Geneious type: restriction site" misc_feature 10113..10118 /Recognition_pattern="A^CCGGT" /label="AgeI, AsiGI, BshTI, CspAI, PinAI" /note="Geneious type: restriction site" misc_feature 10155..10161 /Recognition_pattern="CACCTGC(4/8)" /label="AarI, PaqCI" /note="Geneious type: restriction site" misc_feature 10187..10196 /Recognition_pattern="CACNN^NNGTG" /label="OliI, AleI" /note="Geneious type: restriction site" misc_feature 10187..10196 /Recognition_pattern="CAYNN^NNRTG" /label="MslI, RseI, SmiMI" /note="Geneious type: restriction site" misc_feature 10251..10257 /Recognition_pattern="A^CCWGGT" /label="SexAI, CsiI, MabI" /note="Geneious type: restriction site" misc_feature 10270..10275 /Recognition_pattern="C^GGCCG" /label="BseX3I, BstZI, EagI, EclXI, Eco52I" /note="Geneious type: restriction site" misc_feature 10377..10382 /Recognition_pattern="W^GTACW" /label="TatI" /note="Geneious type: restriction site" misc_feature 10414..10419 /Recognition_pattern="TGG^CCA" /label="BalI, MlsI, MluNI, Mox20I, MscI, Msp20I" /note="Geneious type: restriction site" misc_feature 10488..10493 /Recognition_pattern="AGT^ACT" /label="ScaI, BmcAI, ZrmI" /note="Geneious type: restriction site" misc_feature 10488..10493 /Recognition_pattern="W^GTACW" /label="TatI" /note="Geneious type: restriction site" misc_feature 10500..10505 /Recognition_pattern="C^AATTG" /label="MfeI, MunI" /note="Geneious type: restriction site" misc_feature 10501..10504 /Recognition_pattern="^AATT" /label="MluCI, Sse9I, TasI" /note="Geneious type: restriction site" CDS 10574..10867 /codon_start=1 /locus_tag="phiKo_02" /product="hypothetical protein" /protein_id="AYJ74677.1" /transl_table=11 /translation="VIRIHYVPQVGLPGKRLVYSWSGRVLTVRLEPDGVEDVYDLSVL GPGDEVVGVETETLPFTPILSARLEIDGDLHVTLLHWYEGGEEPELAEEVLDG*" /label="phiKo_02" gene 10574..10867 /locus_tag="phiKo_02" /label="phiKo_02" misc_feature 10739..10744 /Recognition_pattern="GGTCTC(1/5)" /label="Eco31I, BsaI, Bso31I, BspTNI" /note="Geneious type: restriction site" CDS 10860..11111 /codon_start=1 /locus_tag="phiKo_01" /product="hypothetical protein" /protein_id="AYJ74676.1" /transl_table=11 /translation="MARLKIKTHQDRIREAWAALRAERDRRLAETDWVVARAYERGEP VPEAWAAYRQALRDLPALVGEEDLLAGRIPWPEPPGGAS*" /label="phiKo_01" gene 10860..11111 /locus_tag="phiKo_01" /label="phiKo_01" misc_feature 10965..10972 /Recognition_pattern="GCCC^GGGC" /label="SrfI" /note="Geneious type: restriction site" ITR complement(11114..11129) /note="inverted terminal repeat