Thermus oshimai VZ2
- Genus
- Thermus
- Species
- oshimai
- Strain
- VZ2
- Cultivation medium
- Castenholz medium
- Cultivation temperature, °C
- 70
- Genome size, bp
- 2 222 563
- GC content, %
- 68.8
- Assembly level
- Large contigs
- Isolation source
- Golyginskiye Klyuchi, Kamchatka
Sequences
| File | Kind | Version | Sequencing | Assembler | Size |
|---|---|---|---|---|---|
| TOSH_VZ2_genome.gb.gz | annotation | MinION | hybracter v0.10.0 | 1.4 MB |
Replicons
Table (5)
| ID | Name | Topology | Length, bp | GC content, % |
|---|---|---|---|---|
| VZ2_CHR | chromosome | circular | 1 969 864 | 68.8 |
| pVZ2_1 | plasmid pVZ2_1 | circular | 237 164 | 68.7 |
| pVZ2_2 | plasmid pVZ2_2 | linear | 10 189 | 69.0 |
| pVZ2_3 | plasmid pVZ2_3 | linear | 3 729 | 71.4 |
| pVZ2_4 | plasmid pVZ2_4 | linear | 1 617 | 70.1 |
CRISPR-Cas systems
Table (2)
| Subtype | Replicon | Coordinates |
|---|---|---|
| I-E | chromosome | 1 103 528–1 113 064 |
| III-A | chromosome | 1 208 612–1 222 230 |
Integrative elements
Table (1)
| Name | tRNA | Replicon | Coordinates | Length, bp |
|---|---|---|---|---|
| IE1 | tRNA-Arg | chromosome | 915 690–923 652 | 7 963 |