Laboratory of Molecular Genetics of Microorganisms

All bacteriophages

Thermus phage Lalka27c

Host
Thermus thermophilus HB27c
Morphotype
myovirus
Lifecycle
lysogenic
Genome type
dsDNA
Genome length, bp
71 157
GC content, %
70.6
Isolation source
Valentina hot springs, Kunashir Island
Accession
PZ295453.1
Contact
Aleksandr Dmitriev

Genome map

Lalka27c71 157 bp · 83 coding sequences

CRISPR array — 53 549..53 795 · 247 bp · repeat consensus: gtttctcccgtgcgcgcatggaggcaccgUlx-like anti-restriction protein — 27..404 (−) · 378 bpDarB-like anti-restriction protein — 397..6 660 (−) · 6 264 bpssDNA binding protein — 6 786..7 508 (+) · 723 bphypothetical protein — 7 698..8 981 (−) · 1 284 bphypothetical protein — 9 084..9 332 (+) · 249 bphypothetical protein — 9 338..10 009 (+) · 672 bphypothetical protein — 10 047..10 820 (−) · 774 bphypothetical protein — 10 831..11 259 (−) · 429 bphypothetical protein — 11 256..11 885 (−) · 630 bpportal protein — 11 937..13 700 (+) · 1 764 bpminor head protein — 13 687..14 637 (+) · 951 bpvWA domain-containing protein — 14 701..15 681 (+) · 981 bpSpoVR like protein — 15 678..17 024 (+) · 1 347 bpAAA family ATPase — 17 021..18 919 (+) · 1 899 bphypothetical protein — 18 922..19 080 (+) · 159 bphypothetical protein — 19 113..19 337 (+) · 225 bpTerL — 19 402..21 423 (+) · 2 022 bphypothetical protein — 21 420..22 028 (−) · 609 bphypothetical protein — 22 025..22 375 (−) · 351 bpdNMP kinase — 22 356..23 165 (−) · 810 bpnucleotidase — 23 158..23 793 (−) · 636 bpexonuclease — 23 777..25 039 (−) · 1 263 bphypothetical protein — 25 179..25 493 (−) · 315 bphypothetical protein — 25 493..25 912 (−) · 420 bphypothetical protein — 25 975..26 235 (−) · 261 bphypothetical protein — 26 256..26 471 (−) · 216 bpM23 family peptidase — 26 474..27 127 (−) · 654 bpBacteriophage holin family protein — 27 137..27 586 (−) · 450 bphypothetical protein — 27 880..28 296 (−) · 417 bphypothetical protein — 28 305..29 366 (−) · 1 062 bphypothetical protein — 29 370..29 756 (−) · 387 bphypothetical protein — 29 782..31 068 (−) · 1 287 bpbaseplate wedge subunit — 31 068..32 126 (−) · 1 059 bpbaseplate protein — 32 123..32 482 (−) · 360 bphypothetical protein — 32 484..33 050 (−) · 567 bphypothetical protein — 33 043..33 669 (−) · 627 bpputative deoxyribonuclease RhsB — 33 695..33 958 (−) · 264 bpputative zinc metallopeptidase — 33 958..34 395 (−) · 438 bpbaseplate protein — 34 426..35 202 (−) · 777 bphypothetical protein — 35 199..35 411 (−) · 213 bpputative helicase — 35 401..40 548 (−) · 5 148 bptail protein — 40 612..41 994 (−) · 1 383 bpM23 family peptidase — 41 995..44 664 (−) · 2 670 bphypothetical protein — 44 649..44 903 (−) · 255 bptail assembly chaperone — 44 869..45 285 (−) · 417 bpvirion structural protein — 45 356..45 817 (−) · 462 bptail sheath — 45 831..47 570 (−) · 1 740 bphypothetical protein — 47 584..47 793 (−) · 210 bpstructural protein — 47 831..48 703 (−) · 873 bphypothetical protein — 48 713..49 597 (−) · 885 bphypothetical protein — 49 594..50 499 (−) · 906 bptail fiber protein — 50 500..51 303 (−) · 804 bpyqbF-like protein — 51 333..51 737 (−) · 405 bpCas12r1 — 51 839..53 533 (+) · 1 695 bphypothetical protein — 53 878..54 723 (+) · 846 bphypothetical protein — 54 714..54 905 (+) · 192 bphypothetical protein — 54 933..56 441 (−) · 1 509 bphypothetical protein — 56 438..57 085 (−) · 648 bphypothetical protein — 57 099..58 019 (−) · 921 bprecombinase — 58 058..58 975 (+) · 918 bphypothetical protein — 59 005..59 214 (−) · 210 bphypothetical protein — 59 333..59 701 (−) · 369 bphypothetical protein — 59 656..60 498 (−) · 843 bphypothetical protein — 60 485..60 679 (−) · 195 bphypothetical protein — 60 645..60 914 (−) · 270 bpprimase — 60 911..61 534 (−) · 624 bpDnaB-like replicative helicase — 61 522..62 820 (−) · 1 299 bpreplication initiation O-like protein — 62 810..63 745 (−) · 936 bphypothetical protein — 63 745..63 876 (−) · 132 bphypothetical protein — 63 993..64 085 (+) · 93 bpDNA polymerase processivity factor — 64 191..65 246 (−) · 1 056 bphypothetical protein — 65 321..65 575 (−) · 255 bpRecT-like ssDNA annealing protein — 65 587..66 369 (−) · 783 bphypothetical protein — 66 395..66 574 (−) · 180 bphypothetical protein — 66 571..66 894 (−) · 324 bphypothetical protein — 66 915..67 097 (−) · 183 bphypothetical protein — 67 094..67 357 (−) · 264 bphypothetical protein — 67 350..67 499 (−) · 150 bphypothetical protein — 67 492..67 917 (−) · 426 bptranscriptional regulator — 67 939..68 343 (−) · 405 bpLexA-like regulator — 68 458..69 138 (+) · 681 bphypothetical protein — 69 140..69 793 (+) · 654 bpintegrase — 69 793..70 983 (+) · 1 191 bp

Sequences

FileKindVersionSize
Lalka27c_genome.gb.gzannotation46 KB

Description

One of the CRISPR-Cas encoding Lalka phages. See the Lalka27a record for details.

Related publications

  1. A Unique Type V CRISPR-Cas System Encoded by a Group of Thermus Viruses

    Anna B. Trofimova et al.

    bioRxiv (preprint)2026

Projects